Targeted sequencing of Lupinus mexicanus - SRA

SRX22465597: Targeted sequencing of Lupinus mexicanus
1 ILLUMINA (Illumina HiSeq 3000) run: 503,396 spots, 151M bases, 64.2Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 2

PRJNA1021608 • SRP471051 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Lupinus mexicanus

SAMN37564009 • SRS19479414 • All experiments • All runs

Organism: Lupinus mexicanus

Library:

Name: c04eca77-33c0-4417-b98a-6f0029450f5d

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 503,396 spots, 151M bases, 64.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR26766968	503,396	151M	64.2Mb	2023-11-09

ID:: 30451386

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity