Targeted sequencing of Securidaca retusa - SRA

SRX22404842: Targeted sequencing of Securidaca retusa
1 ILLUMINA (Illumina HiSeq 3000) run: 457,326 spots, 137.2M bases, 49.9Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Securidaca retusa

SAMN37561130 • SRS19441516 • All experiments • All runs

Organism: Securidaca retusa

Library:

Name: 4276142b-0bd4-4616-a6a2-1c4aa68d251b

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 457,326 spots, 137.2M bases, 49.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26705240	457,326	137.2M	49.9Mb	2023-11-07

ID:: 30387310

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity