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DRX246248: Illumina HiSeq 2500 paired end sequencing of SAMD00259951
1 ILLUMINA (Illumina HiSeq 2500) run: 109.9M spots, 26.1G bases, 8.3Gb downloads

Submitted by: TSUKUBA
Study: Endosymbiotic interaction of Braarudosphaera bigelowii and its endosymbint
show Abstracthide Abstract
A coccolithophore haptophyte Braarudosphaera bigelowii possesses a cyanobacterial endosymbiont. The endosymbiont performs nitrogen fixation in the host cell, and receives fixed carbon from the host. The endosymbiont is also known as UCYN-A or Candidatus Atelocyanobacterium thalassa, which is unculturable. UCYN-A consists of at least six sub-lineages, UCYN-A1 to UCYN-A2. Of these, the genome of UCYN-A1 and UCYN-A2 were sequenced. The genomes lack some essential genes for such as TCA cycle and Calvin cycle. A flagellate haptophyte Chrysochromulina parkeae is considered as a synonym and an alternate life cycle stage of B. bigelowii. The aim of this study is to understand endosymbiotic relationship of B. bigelowii and its endosymbiont.
Sample: RNA-seq of Braarudosphaera bigelowii
SAMD00259951 • DRS206849 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: PolyA
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward126  reverse

Runs: 1 run, 109.9M spots, 26.1G bases, 8.3Gb
Run# of Spots# of BasesSizePublished
DRR256530109,918,36626.1G8.3Gb2021-10-16

ID:
17175011

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