Targeted sequencing of Pilea grandifolia - SRA

SRX22454894: Targeted sequencing of Pilea grandifolia
1 ILLUMINA (Illumina HiSeq 3000) run: 122,410 spots, 36.7M bases, 10.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 14

PRJNA1022147 • SRP471020 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Pilea grandifolia

SAMN37593425 • SRS19468901 • All experiments • All runs

Organism: Pilea grandifolia

Library:

Name: 33061a68-72b8-49aa-8d89-a7be530b1d96

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 122,410 spots, 36.7M bases, 10.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR26756176	122,410	36.7M	10.7Mb	2023-11-09

ID:: 30440564

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity