U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX5324600: ddRADseq of Mangifera
1 ILLUMINA (Illumina HiSeq 2500) run: 1.4M spots, 196M bases, 85.3Mb downloads

Design: ddRAD seq performed following the protocol of Peterson et al. 2012., with modifications; enzymes used: NlaIII, MluCI; custom barcodes
Submitted by: Florida International University
Study: Mango ddRAD sequencing
show Abstracthide Abstract
We used restriction site associated DNA sequencing to generate genomic single nucleotide polymorphism (SNP) data from 106 mango cultivars from seven geographic regions along with 52 samples of closely related species and unidentified cultivars to identify centers of mango genetic diversity and examine how post-domestication dispersal shaped the geographic distribution of diversity.
Sample:
SAMN10829179 • SRS4319569 • All experiments • All runs
Library:
Name: AA
Instrument: Illumina HiSeq 2500
Strategy: RAD-Seq
Source: GENOMIC
Selection: Reduced Representation
Layout: SINGLE
Runs: 1 run, 1.4M spots, 196M bases, 85.3Mb
Run# of Spots# of BasesSizePublished
SRR85219001,389,807196M85.3Mb2019-02-01

ID:
7199712

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...