Targeted sequencing of Indigofera pretoriana - SRA

SRX22453042: Targeted sequencing of Indigofera pretoriana
1 ILLUMINA (Illumina HiSeq 3000) run: 969,319 spots, 290.8M bases, 113.5Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 4

PRJNA1022015 • SRP471008 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Indigofera pretoriana

SAMN37579293 • SRS19467073 • All experiments • All runs

Organism: Indigofera pretoriana

Library:

Name: e81bab8b-7dca-46a7-aea2-39400e6b626a

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 969,319 spots, 290.8M bases, 113.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR26754322	969,319	290.8M	113.5Mb	2023-11-09

ID:: 30438712

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity