Targeted sequencing of Calliandra laxa var. stipulacea - SRA

SRX22454455: Targeted sequencing of Calliandra laxa var. stipulacea
1 ILLUMINA (Illumina HiSeq 3000) run: 413,375 spots, 124M bases, 48.4Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 13

PRJNA1022141 • SRP471016 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Calliandra laxa var. stipulacea

SAMN37590197 • SRS19468459 • All experiments • All runs

Organism: Calliandra laxa var. stipulacea

Library:

Name: 1e887a78-49e2-4c0e-920c-aa315adfc411

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 413,375 spots, 124M bases, 48.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR26755924	413,375	124M	48.4Mb	2023-11-09

ID:: 30440125

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