Targeted sequencing of Rubus lobophyllus - SRA

SRX22456466: Targeted sequencing of Rubus lobophyllus
1 ILLUMINA (Illumina HiSeq 3000) run: 312,965 spots, 93.9M bases, 34.5Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 11

PRJNA1022323 • SRP471024 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Rubus lobophyllus

SAMN37598348 • SRS19470471 • All experiments • All runs

Organism: Rubus lobophyllus

Library:

Name: 8da2132a-28e4-440f-bd33-206d4e7b7cb2

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 312,965 spots, 93.9M bases, 34.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR26757571	312,965	93.9M	34.5Mb	2023-11-09

ID:: 30442136

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