MiSeq of Serpentovirus sp.: Green Tree Python Oral Swab - SRA

SRX20670452: MiSeq of Serpentovirus sp.: Green Tree Python Oral Swab
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 254.1M bases, 102.8Mb downloads

Design: Previously extracted RNA was concentrated using Zymo Clean RNA Clean and Concentrator kit (Zymo Research, Irvine, CA, USA). Ribosomal RNA was depleted using NEBNext rRNA Depletion Kit (Human/Mouse/Rat) (NEBNext, Ipswich, MA, USA) according to manufacturers recommendations supplemented with AMPure XP beads (NEBNext, Ipswich, MA, USA). Libraries were generated using NEBNext Ultra II RNA Library Prep kit (NEBNext, Ipswich, MA, USA) using the manufacturers protocols. Sample libraries were pooled and loaded into an Illumina 600 cycle V3 MiSeq cartridge (Illumina Inc., San Diego, CA, USA) and run on an Illumina MiSeq system

Submitted by: University of Florida, College of Veterinary Medicine

Study: Uncharacterized Serpentovirus sp. MiSeq Data

PRJNA982273 • SRP443160 • All experiments • All runs

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MiSeq raw unpaired read data from uncharacterized serpentovirus species.

Sample:

SAMN35689711 • SRS17966185 • All experiments • All runs

Organism: Serpentovirus sp. R21.2443

Library:

Name: R21.2443lib

Instrument: Illumina MiSeq

Strategy: WGS

Source: VIRAL RNA

Selection: RANDOM PCR

Layout: PAIRED

Runs: 1 run, 1.2M spots, 254.1M bases, 102.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR24909020	1,166,731	254.1M	102.8Mb	2024-02-26

ID:: 28100018

SRA

Sequence Read Archive

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