U.S. flag

An official website of the United States government


Send to:

Choose Destination

SRX13266664: WGS data of Solanum tarnii x Solanum tuberosum: collected from leaf
1 ILLUMINA (Illumina NovaSeq 6000) run: 138.8M spots, 41.6G bases, 12.7Gb downloads

Design: The genomic DNA collected from each sample was randomly sheared into small fragments. The generated fragments were end repaired, A-tailed and Illumina adapter was ligated. Following PCR amplificatin of the the fragments, they were size selected, and purified.
Submitted by: McGill University
Study: Genome sequencing of Solanum genomes and the cold regulated transcriptome of a cold tolerant Solanum species
show Abstracthide Abstract
Assembly of nuclear and organelle genomes of each sequenced individual of potato, along with annotation and structural variation analysis. Differential expression analyses of selected individuals will be carried out to identify potential cold regulation.
SAMN23441006 • SRS11188346 • All experiments • All runs
Name: SH7-18-3_Illumina
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 138.8M spots, 41.6G bases, 12.7Gb
Run# of Spots# of BasesSizePublished


Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...