Exon-capture sequencing of Syrphidae: Platycheirus ambiguus - SRA

SRX15556244: Exon-capture sequencing of Syrphidae: Platycheirus ambiguus
1 ILLUMINA (NextSeq 500) run: 496,495 spots, 149.9M bases, 66.5Mb downloads

Design: Exon-capture sequencing using BaitFisher for bait design

Submitted by: Zoologisches Forschungsmuseum Alexander Koenig

Study: Exon-capture sequencing of predatory flower flies (Diptera, Syrphidae)

PRJNA837085 • SRP377953 • All experiments • All runs

show Abstracthide Abstract

With the help of the BaitFisher software, we developed a new bait kit (SYRPHIDAE1.0) to target 1945 CDS regions belonging to 1312 orthologous genes. This new bait kit was successfully used to exon-capture the targeted loci in 121 flower fly species across the different subfamilies of Syrphidae.

Sample:

SAMN28189073 • SRS13265979 • All experiments • All runs

Organism: Platycheirus ambiguus

Library:

Name: AHE_101_P_ambiguus

Instrument: NextSeq 500

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 496,495 spots, 149.9M bases, 66.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR19503582	496,495	149.9M	66.5Mb	2022-12-13

ID:: 22153968

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