Single-cell RNA-Seq of environmental protist - SRA

SRX6831926: Single-cell RNA-Seq of environmental protist
1 ILLUMINA (Illumina HiSeq 2500) run: 6.8M spots, 3.4G bases, 1.9Gb downloads

Design: Smart-seq2 with modifications (60% less oligo-dT, biotinylated 5 ends of primers, freeze-thaw-cycles for lysis, half of standard volumes used, 17% PEG-based in-house beads for purification of amplified cDNA)

Submitted by: Uppsala University

Study: Single-cell transcriptomes of environmental protists

PRJNA564423 • SRP221397 • All experiments • All runs

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Single-cell transcriptomes of environmental protists isolated from ponds, lakes and soil around Uppsala (Sweden)

Sample: sediment metagenome

SAMN12712281 • SRS5373715 • All experiments • All runs

Organism: Metamonada sp. 39W

Library:

Name: 39W

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 6.8M spots, 3.4G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR10100052	6,755,302	3.4G	1.9Gb	2020-09-30

ID:: 8995184

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