U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX15456948: Capture-seq of Angiosperms353 loci in Symplocos berteroi
1 ILLUMINA (Illumina NovaSeq 6000) run: 202,463 spots, 61M bases, 19.6Mb downloads

Design: DNA was extracted using a CTAB protocol and used as input for targeted sequencing with the Angioserms353 probes set.
Submitted by: University of Florida
Study: Temperate radiations and tropical dominance: the diversification and evolution of the plant clade Ericales
show Abstracthide Abstract
The staggering diversity of tropical plants contributes to a latitudinal diversity gradient of increased species richness towards equatorial latitudes; a pattern found across the tree of life. Despite the significance of tropical biomes and the evolutionary/ecological importance of movements across, into, and out of tropical latitudes, the sparse sampling of species for both DNA sequences and morphological traits has inhibited progress in addressing major evolutionary questions regarding the origin, diversification, and niche evolution of lineages with temperate and tropical transitions. This study uses transcriptome, targeted-capture, and genome skimming sequencing to overcome these limitations for the diverse and ecologically important plant clade Ericales which includes a variety of economically important species such as blueberries, kiwi fruit, persimmon, Brazil nut, timber woods (e.g., ebony), azaleas, rhododendrons, and even carnivorous plants. These newly collected "big data" resources will allow researchers to discover genetic and morphological factors that contribute to the origin and maintenance of the biological diversity in Earth's forests
Sample:
SAMN28503226 • SRS13177727 • All experiments • All runs
Library:
Name: UFL_394806_P004_WD11-CAPSeq
Instrument: Illumina NovaSeq 6000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 202,463 spots, 61M bases, 19.6Mb
Run# of Spots# of BasesSizePublished
SRR19402274202,46361M19.6Mb2022-05-25

ID:
22013907

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...