Targeted sequencing of Chamaecrista dawsonii - SRA

SRX22463445: Targeted sequencing of Chamaecrista dawsonii
1 ILLUMINA (Illumina HiSeq 3000) run: 88,036 spots, 26.4M bases, 11.1Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Chamaecrista dawsonii

SAMN37580902 • SRS19477446 • All experiments • All runs

Organism: Chamaecrista dawsonii

Library:

Name: 353389e9-1fc2-4a57-bfda-80fba0d0243c

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 88,036 spots, 26.4M bases, 11.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764670	88,036	26.4M	11.1Mb	2023-11-09

ID:: 30449234

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity