Targeted sequencing of Senna affinis - SRA

SRX22463826: Targeted sequencing of Senna affinis
1 ILLUMINA (Illumina HiSeq 3000) run: 666,599 spots, 200M bases, 96Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 3

PRJNA1021620 • SRP471047 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Senna affinis

SAMN37565593 • SRS19477822 • All experiments • All runs

Organism: Senna affinis

Library:

Name: 1f7bddb9-ee17-4a13-a770-b2f1bc2fdf53

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 666,599 spots, 200M bases, 96Mb

Run	# of Spots	# of Bases	Size	Published
SRR26765381	666,599	200M	96Mb	2023-11-09

ID:: 30449615

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