U.S. flag

An official website of the United States government


Send to:

Choose Destination

SRX2626336: Alphaproteobacteria bacterium UBA998
1 ILLUMINA (Illumina HiSeq 1000) run: 25,972 spots, 792,781 bases, 375,823b downloads

Design: BWA (BWA-MEM) mapping of Alphaproteobacteria bacterium UBA998 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 25.38
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Alphaproteobacteria bacterium UBA998 genome recovered from SRX748871
SAMN06452144 • SRS2036293 • All experiments • All runs
Name: SRX748871.b5.bam
Instrument: Illumina HiSeq 1000
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 25,972 spots, 792,781 bases, 375,823b
Run# of Spots# of BasesSizePublished


Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...