ddRAD data of Anolis scypheus sample MTR33729 - SRA

SRX10367869: ddRAD data of Anolis scypheus sample MTR33729
1 ILLUMINA (Illumina HiSeq 2500) run: 3.9M spots, 1.1G bases, 383.3Mb downloads

Design: A double restriction-site associated DNA library (ddRAD) was generated at the University of Wisconsin Biotechnology Center. Genomic DNA was digested with the PstI and MspI restriction enzymes, and the resulting fragments were tagged with individual barcodes, PCR-amplified, multiplexed, and sequenced on a single lane on an Illumina HiSeq 2500 platform (rapid run mode). The data was demultiplexed using Ipyrad v. 0.7.30.

Submitted by: Smithsonian National Museum of Natural History

Study: Restriction site-associated DNA markers from mainland Anolis lizard species

PRJNA492310 • SRP162266 • All experiments • All runs

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This project aims to 1) investigate the history of mainland anole lizard populations, 2) examine how tropical species responded to former environmental change, 3) elucidate whether and how environmental gradients contribute to genomic variation within and among species.

Sample:

SAMN18340923 • SRS8483282 • All experiments • All runs

Organism: Anolis scypheus

Library:

Name: MTR33729

Instrument: Illumina HiSeq 2500

Strategy: RAD-Seq

Source: GENOMIC

Selection: Reduced Representation

Layout: SINGLE

Runs: 1 run, 3.9M spots, 1.1G bases, 383.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR13990287	3,877,660	1.1G	383.3Mb	2021-03-17

ID:: 13684443

SRA

Sequence Read Archive

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