U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ERX4603929: PacBio RS sequencing
1 PACBIO_SMRT (PacBio RS) run: 163,482 spots, 1.1G bases, 3.5Gb downloads

Submitted by: FRIEDRICH SCHILLER UNIVERSITY JENA
Study: Acidithrix sp. C25 was a representative iron snow strain and studies of chemical communication and interspecies aggregation mechanism between Acidithrix sp. C25 and Acidiphilium sp. C61 were conducted. Here we sequenced the whole genome of Acidithrix sp. C25 to broaden our knowledge of its metabolic activities in iron snow microbiome.
show Abstracthide Abstract
Acidithrix sp. C25 is heterotrophic acidophilic iron-oxidizing bacterium isolated from central basin of acidic lignite mine lake 77 located in the Lusatian district of Brandenburg, Germany. Acidithrix genus is a novel genus that belongs to Acidimicrobiaceae family within the class Acidimicrobiia and only one representative strain Acidithrix ferrooxidans Py-F3 was isolated and sequenced (Jones and Barrie Johnson 2015). Here, we report the draft genome sequence of Acidithrix sp. C25 to enlarge the database of the new Acidithrix genus and a preliminary genome analysis that reveals metabolic potential in iron-rich pelagic aggregates (iron snow).
Sample: Acidithrix sp. C25 genome sequencing
SAMEA7354396 • ERS5112870 • All experiments • All runs
Library:
Name: unspecified
Instrument: PacBio RS
Strategy: WGS
Source: GENOMIC
Selection: other
Layout: SINGLE
Runs: 1 run, 163,482 spots, 1.1G bases, 3.5Gb
Run# of Spots# of BasesSizePublished
ERR4682477163,4821.1G3.5Gb2020-11-18

ID:
12449757

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...