Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX475075: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319812' containing sample 'ABC020043871'
1 ILLUMINA (Illumina HiSeq 2000) run: 3M spots, 610.9M bases, 287.6Mb downloads

UUID: 262fb66a-72d6-47b9-a109-85210b8bdc81

Design: Illumina sequencing of Streptococcus pyogenes ABC020043871 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA232987 • SRP038791 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020043871

SAMN02567336 • SRS560864 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020043871

Library:

Name: Pond-319812

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471666.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMXL

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56805

research_project: RP-560

root_sample_id: SM-4P3M6

sample_id: SM-5CMXL

work_request: 39853

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-19 09:03:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3M spots, 610.9M bases, 287.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1174935	3,024,204	610.9M	287.6Mb	2014-02-24

ID:: 655565

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