Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX475123: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319842' containing sample 'ABC020029576'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.3M spots, 669.7M bases, 314.4Mb downloads

UUID: dfaa3a68-d0ae-4f33-b3a8-4cb2d0c1257f

Design: Illumina sequencing of Streptococcus pyogenes ABC020029576 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA233250 • SRP038839 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020029576

SAMN02567599 • SRS560912 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020029576

Library:

Name: Pond-319842

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471696.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMYG

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56835

research_project: RP-560

root_sample_id: SM-4ME6D

sample_id: SM-5CMYG

work_request: 39853

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-19 09:03:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.3M spots, 669.7M bases, 314.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1174983	3,315,130	669.7M	314.4Mb	2014-02-24

ID:: 655613

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