Target capture of Rhacophorus parachuting frogs from Sumatra: pardali... - SRA

SRX8389117: Target capture of Rhacophorus parachuting frogs from Sumatra: pardalissungaipenuh5511FFS
1 ILLUMINA (HiSeq X Ten) run: 1.4M spots, 173M bases, 74.5Mb downloads

Design: Transcriptome-based probes from two species of rhacophorus used to for Arbor-biosystems style capture experiment. Data quality filtered using secapr

Submitted by: University of Texas Arlington

Study: Sumatra Rhacophorus Target Capture Project

PRJNA634787 • SRP263308 • All experiments • All runs

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These data are from the manuscript, 'Impacts of the Toba eruption and montane forest expansion on diversification in Sumatran parachuting frogs (Rhacophorus)'. They are raw R1 and R2 reads from a target capture experiment capturing 950 protein coding loci. The goal of the study was to compare genetic diversity between populations near and far from the super eruption of volcano Toba.

Sample:

SAMN15009183 • SRS6702542 • All experiments • All runs

Organism: Rhacophorus pardalis

Library:

Name: pardalissungaipenuh5511FFS

Instrument: HiSeq X Ten

Strategy: Targeted-Capture

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 1.4M spots, 173M bases, 74.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR11838692	1,429,477	173M	74.5Mb	2020-11-24

ID:: 10908118

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