Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX360768: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-230604' containing sample 'ORNL_W42_C01'
7 ILLUMINA (Illumina HiSeq 2000) runs: 21M spots, 4.2G bases, 2.5Gb downloads

UUID: 30d0a9e4-7063-44cf-99c3-d58eb1f3521e

Design: Illumina sequencing of Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-25 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197082 • SRP030601 • All experiments • All runs

Sample: Generic sample from Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-25

SAMN00699769 • SRS255875 • All experiments • All runs

Organism: Phascolarctobacterium sp. ORNL_6EZ5-Gt_3_Pl1-25

Library:

Name: Pond-230604

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 302729.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:41WNE

material_type: DNA:DNA Somatic

product_order: PDO-526

product_part_number: P-WG-0004

project: G32731

research_project: RP-129

root_sample_id: SM-3QFJ4

sample_id: SM-41WNE

work_request: 35919

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 19:07:00.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 7 runs, 21M spots, 4.2G bases, 2.5Gb

Run	# of Spots	# of Bases	Size	Published
SRR1004141	3,009,277	607.9M	374.6Mb	2013-09-27
SRR1004142	2,989,410	603.9M	372.4Mb	2013-09-27
SRR1004143	2,997,780	605.6M	373.9Mb	2013-09-27
SRR1004144	2,973,926	600.7M	369.5Mb	2013-09-27
SRR1004145	3,038,822	613.8M	378.3Mb	2013-09-27
SRR1004146	3,000,454	606.1M	373.5Mb	2013-09-27
SRR1004147	2,960,887	598.1M	368Mb	2013-09-27

ID:: 509973

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