U.S. flag

An official website of the United States government


Send to:

Choose Destination

SRX19793165: Capture-seq of Angiosperms353 loci in Trochocarpa_laurina
1 ILLUMINA (Illumina HiSeq 2000) run: 90,783 spots, 45.6M bases, 15.6Mb downloads

Design: DNA was extracted using a CTAB protocol and used as input for targeted sequencing with the Angioserms353 probes set.
Submitted by: University of Florida
Study: Temperate radiations and tropical dominance: the diversification and evolution of the plant clade Ericales
show Abstracthide Abstract
The staggering diversity of tropical plants contributes to a latitudinal diversity gradient of increased species richness towards equatorial latitudes; a pattern found across the tree of life. Despite the significance of tropical biomes and the evolutionary/ecological importance of movements across, into, and out of tropical latitudes, the sparse sampling of species for both DNA sequences and morphological traits has inhibited progress in addressing major evolutionary questions regarding the origin, diversification, and niche evolution of lineages with temperate and tropical transitions. This study uses transcriptome, targeted-capture, and genome skimming sequencing to overcome these limitations for the diverse and ecologically important plant clade Ericales which includes a variety of economically important species such as blueberries, kiwi fruit, persimmon, Brazil nut, timber woods (e.g., ebony), azaleas, rhododendrons, and even carnivorous plants. These newly collected "big data" resources will allow researchers to discover genetic and morphological factors that contribute to the origin and maintenance of the biological diversity in Earth's forests
SAMN32954258 • SRS17155582 • All experiments • All runs
Name: UFL_394806_P025_WA04-CAPSeq
Instrument: Illumina HiSeq 2000
Strategy: Targeted-Capture
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 90,783 spots, 45.6M bases, 15.6Mb
Run# of Spots# of BasesSizePublished


Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...