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SRX20082024: Sequence capture of Australian Asteraceae
1 ILLUMINA (Illumina NovaSeq 6000) run: 575,885 spots, 144.8M bases, 52Mb downloads

Design: Libraries were prepared from genomic DNA using the QIAseq FX DNA Library UDI-A Kit (96) adjusted for use on the Echo Acoustic Liquid Handler. Libraries were captured using a myBaits Angiosperms 353 kit following manufacturer's instructions.
Submitted by: CSIRO
Study: Sequence capture data for Cotula (Asteraceae) and relatives
show Abstracthide Abstract
Tribe Anthemideae (Asteraceae) is represented in Australia with only nine species of Cotula and Leptinella. The generic placement of Cotula alpina is considered problematic, as it shares the stoloniferous and scapose habit of Leptinella but lacks corollas in female florets, a trait traditionally considered defining of Cotula. A previous phylogenetic analysis of Leptinella showed the species nested within that genus, but some uncertainty remained and no taxonomic change was made. Here, we combined target capture data from three different sequencing initiatives to reconstruct a phylogeny of Australian native and introduced Anthemideae to resolve this outstanding question. We confirm previous results with a high degree of support and formally transfer Cotula alpina to the genus Leptinella.
Sample: Captured with myBaits Angiosperms 353 kit: Standard plant (TruSeq 8 bp blockers, 24 hr hybridisation at 65degC)
SAMN34237243 • SRS17414880 • All experiments • All runs
Library:
Name: Leptinella_plumosa_CANB00829906_AG585
Instrument: Illumina NovaSeq 6000
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 575,885 spots, 144.8M bases, 52Mb
Run# of Spots# of BasesSizePublished
SRR24286526575,885144.8M52Mb2024-05-01

ID:
27485012

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