Targeted sequencing of Acacia scirpifolia - SRA

SRX22452570: Targeted sequencing of Acacia scirpifolia
1 ILLUMINA (Illumina HiSeq 3000) run: 1.5M spots, 436.4M bases, 165.4Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 4

PRJNA1022015 • SRP471008 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Acacia scirpifolia

SAMN37578684 • SRS19466601 • All experiments • All runs

Organism: Acacia scirpifolia

Library:

Name: fd4c8e85-33bd-40f9-bd98-fd5f45ef4b29

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.5M spots, 436.4M bases, 165.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR26753769	1,454,594	436.4M	165.4Mb	2023-11-09

ID:: 30438240

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