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SRX081452: Indexed sequencing of MTB and E.coli strains
1 ILLUMINA (Illumina HiSeq 2000) run: 2.7M spots, 563.8M bases, 360.1Mb downloads

UUID: a1b26fc2-2ee6-4340-a5b2-13f39f188159
Design: Illumina sequencing of Escherichia coli PBD22 via random selection
Submitted by: Broad Institute (BI)
Study: Bacterial/Fungal Persistence Gene Identification Multi-Isolate Project
PRJNA38649 • SRP001124 • All experiments • All runs
show Abstracthide Abstract
Persistence Comparative
Sample: Generic sample from Escherichia coli PBD22
SAMN00631847 • SRS213755 • All experiments • All runs
Organism: Escherichia coli PBD22
Library:
Name: Pond-67162
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
TTGAATAG
110  reverse

Experiment attributes: (show all 10 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 100243.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:1X2JR
material_type: DNA:DNA Somatic
primary_disease: Persistence Comparative: E.coli
project: G13328
root_sample_id: SM-1RKXS
sample_id: SM-1X2JR
work_request: 25407
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2011-07-06 20:10:10.0GAPipelineRTA1.12.4.1Sequencer Application 1.4.5
Runs: 1 run, 2.7M spots, 563.8M bases, 360.1Mb
Run# of Spots# of BasesSizePublished
SRR3261352,684,967563.8M360.1Mb2011-08-02

ID:
92097

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