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SRX1085356: Rifle well FP-101 under low O2 conditions; 0.1 micron filter; full assembly
1 ILLUMINA (Illumina HiSeq 2000) run: 178.9M spots, 53.7G bases, 34Gb downloads

Design: adaptor-trimmed raw reads
Submitted by: UNIVERSITY OF CALIFORNIA, BERKELEY
Study: Terrestrial subsurface C, N, S and H cycles cross-linked by metabolic handoffs
show Abstracthide Abstract
Subsurface processes impact the composition and functioning of the biosphere and atmosphere over both short and geological timescales. Below the soil zone, the microorganisms that mediate transformations of nutrients, trace gases and contaminants are particularly poorly understood. Here, we analyzed 2,542 high-quality draft and complete bacterial and archaeal genomes newly reconstructed from terabases of sequence data collected from sediment and groundwater. This unprecedented scale of genome sampling from a single site represents ~28% of the organisms detected. Analysis of the genome dataset revealed that multiple organisms, including some from ~34 newly detected phyla, are often required to complete redox pathways. Thus, we infer that a complex network of metabolic handoffs extensively cross-links subsurface biogeochemical cycles.
Sample:
SAMN03842437 • SRS981370 • All experiments • All runs
Library:
Name: SRA_RIFCSPLOWO2_01_FULL
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward151  reverse

Links:
Runs: 1 run, 178.9M spots, 53.7G bases, 34Gb
Run# of Spots# of BasesSizePublished
SRR2090159178,861,03753.7G34Gb2015-12-10

ID:
1589912

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