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SRX873586: Whole Genome Sequencing of Candidatus Pelagibacter sp. HIMB122
1 ILLUMINA (Illumina HiSeq 2500) run: 8.3M spots, 2.5G bases, 1.5Gb downloads

Submitted by: DOE JOINT GENOME INSTITUTE (JGI)
Study: Candidatus Pelagibacter sp. HIMB122 Genome sequencing
show Abstracthide Abstract
The heterotrophic alphaproteobacterial clade SAR11 accounts for approximately 25% to 50% of microbial plankton cells in the ocean surface layer, making it key to understanding the marine carbon cycle. Genome streamlining has been implicated as an important factor in the evolution of SAR11 genomes. Ecological and genomic evidence suggest that at least three SAR11 ecotypes, each with a different seasonal and spatial distribution pattern, occupy the temperate ocean surface layer. Analysis of sequenced genomes aims to develop evolutionary models for the dominance of this clade and to reveal what adaptations, particularly organic carbon substrate specificities, distinguish the SAR11 ecotypes.
Sample: Candidatus Pelagibacter sp. HIMB122
SAMN02744629 • SRS843558 • All experiments • All runs
Library:
Name: OYAT
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward151  reverse

Runs: 1 run, 8.3M spots, 2.5G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR17994228,322,8132.5G1.5Gb2015-02-20

ID:
1251377

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