Whole genome seq of Streptococcus pseudopneumoniae clinical isolate: ... - SRA

SRX761939: Whole genome seq of Streptococcus pseudopneumoniae clinical isolate: Sample 1271.rep2_SPSE
1 ILLUMINA (Illumina HiSeq 2000) run: 506,371 spots, 95M bases, 65Mb downloads

Design: DNA was extracted using UltraClean microbial DNA isolation kit (Mo Bio). Shotgun sequencing libraries were prepared using Fragmentase (Epicentre BioTechnologies), standard Y-adaptor ligation, PCR amplification using Kapa HiFi (KAPA Biosystems), and were purified using Agencourt AMPure XP (Beckman Coulter).

Submitted by: University of Washington

Study: Bacterial isolates from intensive care units

PRJNA267549 • SRP049998 • All experiments • All runs

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Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units.

Sample:

SAMN03197241 • SRS746449 • All experiments • All runs

Organism: Streptococcus pseudopneumoniae

Library:

Name: 1271.rep2_SPSE

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 506,371 spots, 95M bases, 65Mb

Run	# of Spots	# of Bases	Size	Published
SRR1655473	506,371	95M	65Mb	2015-07-07

ID:: 1100958

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