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SRX9176015: This study utilized metagenomic sequencing to elucidate the interaction of sugarcane culture with the soil microorganisms involved in the biogeochemical carbon (C) and nitrogen (N) cycles by determining the diversity of genes involved in the metabolism of
1 ILLUMINA (Illumina HiScanSQ) run: 11.2M spots, 2.2G bases, 1.4Gb downloads

Design: Soil DNA was extracted using the FastDNA SPIN Kit for Soil. The libraries were prepared using the Illumina Nextera sample preparation kit (Illumina) and sequenced in the Illuminas HiScanSQ System (Illumina) in a Rapid Run Mode to generate 2 100 bp paired-end reads.
Submitted by: Universidade Estadual Paulista - Faculdade de Ciencias Agrarias e Veterinarias, FCAV/UNESP
Study: Taxonomic and functional microbial profiles of sugarcane and forest soils in the tropical region
show Abstracthide Abstract
This study utilized metagenomic sequencing to elucidate the interaction of sugarcane culture with the soil microorganisms involved in the biogeochemical carbon (C) and nitrogen (N) cycles by determining the diversity of genes involved in the metabolism of these elements.
Sample: Natural Forest wet soils
SAMN16238505 • SRS7413311 • All experiments • All runs
Organism: soil metagenome
Library:
Name: FOR-W_2
Instrument: Illumina HiScanSQ
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 11.2M spots, 2.2G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR1269634311,157,0012.2G1.4Gb2020-09-28

ID:
11951833

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