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SRX710889: Whole genome shotgun sequencing of Salmonella enterica str. FDA00004251 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 534.6M bases, 325.5Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: GenomeTrakr Project: US Food and Drug Administration
PRJNA186035 • SRP018785 • All experiments • All runs
show Abstracthide Abstract
Currently encompasses whole genome sequencing of cultured pathogens as part of a surveillance project for the rapid detection of outbreaks of foodborne illnesses
Sample:
SAMN02847693 • SRS709635 • All experiments • All runs
Organism: Salmonella enterica
Library:
Name: Salmonella enterica str. FDA00004251 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica str. FDA00004251.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 1.2M spots, 534.6M bases, 325.5Mb
Run# of Spots# of BasesSizePublished
SRR15866101,166,383534.6M325.5Mb2014-09-26

ID:
1002083

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