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SRX8341549: WGS on Collinsella tanakaei An712
1 ILLUMINA (NextSeq 500) run: 2.9M spots, 869.3M bases, 317.1Mb downloads

Design: Nextera XT running on NextSeq 500
Submitted by: Veterinary Research Institute
Study: Whole genome sequencing of chicken gut anaerobes
show Abstracthide Abstract
A necessary step in the understanding a function of gut microbiota is to obtain gut anaerobes in pure cultures, sequence them completely, predict their characteristic features and use them in all downstream experiments. In this study we therefore cultured and sequenced isolates from chicken caecum among which we identified isolates belonging to 6 different phyla including Firmicutes, Bacteroidetes, Actinobacteria, Proteobacteria, Verrucomicrobia, Elusimicrobia and Synergistetes.
Sample:
SAMN14913588 • SRS6665687 • All experiments • All runs
Library:
Name: An712
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 2.9M spots, 869.3M bases, 317.1Mb
Run# of Spots# of BasesSizePublished
SRR117894042,878,434869.3M317.1Mb2020-05-15

ID:
10849658

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