Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX480066: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320873' containing sample 'CIDEIM-1-49375'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.2M spots, 655M bases, 285.6Mb downloads

UUID: 0fdc8413-1bfa-4982-b268-988415217c90

Design: Illumina sequencing of Mycobacterium tuberculosis 49375 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - Taiwan

PRJNA227752 • SRP039325 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis 49375

SAMN02402663 • SRS565204 • All experiments • All runs

Organism: Mycobacterium tuberculosis 49375

Library:

Name: Pond-320873

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 455358.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:59EX5

material_type: DNA:DNA Somatic

product_order: PDO-2505

product_part_number: P-WG-0004

project: G54078

research_project: RP-114

root_sample_id: SM-4Q56S

sample_id: SM-59EX5

work_request: 39447

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-25 22:40:03.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.2M spots, 655M bases, 285.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1181090	1,637,091	330.7M	145.2Mb	2014-03-01
SRR1181121	1,605,669	324.3M	140.4Mb	2014-03-01

ID:: 669500

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