Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX480022: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320879' containing sample 'TB_RSA184' from individual 'SS1019'
2 ILLUMINA (Illumina HiSeq 2000) runs: 1.9M spots, 377.8M bases, 159.2Mb downloads

UUID: 7f3471dd-8f12-4cf4-9034-d2464c3414b8

Design: Illumina sequencing of Mycobacterium tuberculosis TB_RSA184 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - MRC SA

PRJNA228179 • SRP039323 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis TB_RSA184

SAMN02403625 • SRS565202 • All experiments • All runs

Organism: Mycobacterium tuberculosis TB_RSA184

Library:

Name: Pond-320879

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 455364.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:59EXB

material_type: DNA:DNA Somatic

product_order: PDO-2552

product_part_number: P-WG-0004

project: G54684

research_project: RP-114

root_sample_id: SM-4PO1V

sample_id: SM-59EXB

work_request: 39447

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-25 22:40:03.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 1.9M spots, 377.8M bases, 159.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180998	951,830	192.3M	82.1Mb	2014-03-01
SRR1181062	918,487	185.5M	77.1Mb	2014-03-01

ID:: 669456

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