Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473578: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322365' containing sample 'M1638'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 455.2M bases, 178Mb downloads

UUID: 5426544d-1991-4cde-96f5-109b1fa81ea8

Design: Illumina sequencing of Mycobacterium tuberculosis M1638 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235718 • SRP038553 • All experiments • All runs

Sample:

SAMN02599053 • SRS559862 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1638

Library:

Name: Pond-322365

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485171.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5J6

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57788

research_project: RP-114

root_sample_id: SM-4P8SM

sample_id: SM-5G5J6

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 455.2M bases, 178Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173122	1,123,496	226.9M	88.6Mb	2014-02-20
SRR1173191	1,129,948	228.2M	89.4Mb	2014-02-20

ID:: 654068

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