Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473565: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322368' containing sample 'M1728'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.5M spots, 508.9M bases, 202Mb downloads

UUID: d96faf29-f594-4e23-aea8-896118789564

Design: Illumina sequencing of Mycobacterium tuberculosis M1728 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235723 • SRP038544 • All experiments • All runs

Sample:

SAMN02599058 • SRS559851 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1728

Library:

Name: Pond-322368

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485174.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5J9

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57793

research_project: RP-114

root_sample_id: SM-4P8SR

sample_id: SM-5G5J9

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.5M spots, 508.9M bases, 202Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173104	1,257,072	253.9M	100.6Mb	2014-02-20
SRR1173286	1,262,212	255M	101.3Mb	2014-02-20

ID:: 654055

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity