Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473557: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322786' containing sample 'TKK_05MA_0004' from individual '023-06-0004'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.1M spots, 431.7M bases, 170.7Mb downloads

UUID: 08bc2380-c944-47e4-a0ac-54b8c5351e28

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_05MA_0004 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235493 • SRP038537 • All experiments • All runs

Sample:

SAMN02585983 • SRS559844 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_05MA_0004

Library:

Name: Pond-322786

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485290.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5WY

material_type: DNA:DNA Somatic

product_order: PDO-2815

product_part_number: P-WG-0033

project: G58237

research_project: RP-114

root_sample_id: SM-4Q737

sample_id: SM-5G5WY

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.1M spots, 431.7M bases, 170.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173087	1,075,627	217.3M	85.8Mb	2014-02-20
SRR1175329	1,061,347	214.4M	84.9Mb	2014-02-24

ID:: 654047

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