Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473556: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322415' containing sample 'M1955'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.2M spots, 448.9M bases, 179.2Mb downloads

UUID: 6be10cb4-8418-4b79-a779-e3da397716b7

Design: Illumina sequencing of Mycobacterium tuberculosis M1955 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235743 • SRP038536 • All experiments • All runs

Sample:

SAMN02599078 • SRS559843 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1955

Library:

Name: Pond-322415

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485221.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5KL

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57813

research_project: RP-114

root_sample_id: SM-4P8TD

sample_id: SM-5G5KL

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.2M spots, 448.9M bases, 179.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173078	1,105,587	223.3M	89Mb	2014-02-20
SRR1173655	1,116,831	225.6M	90.2Mb	2014-02-20

ID:: 654046

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