Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473555: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322757' containing sample 'H1996'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 457.7M bases, 174Mb downloads

UUID: e0064f8a-0816-46b2-a6b6-a1d1fdf64d31

Design: Illumina sequencing of Mycobacterium tuberculosis H1996 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235838 • SRP038535 • All experiments • All runs

Sample:

SAMN02599172 • SRS559842 • All experiments • All runs

Organism: Mycobacterium tuberculosis H1996

Library:

Name: Pond-322757

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485261.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5W5

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57927

research_project: RP-114

root_sample_id: SM-4PA4F

sample_id: SM-5G5W5

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 457.7M bases, 174Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173077	1,123,047	226.9M	86.4Mb	2014-02-20
SRR1173110	1,142,644	230.8M	87.6Mb	2014-02-20

ID:: 654045

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity