Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473528: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322764' containing sample 'TKK_05SA_0020' from individual '023-06-0020'
2 ILLUMINA (Illumina HiSeq 2000) runs: 1.9M spots, 383.4M bases, 142.9Mb downloads

UUID: f6f1a01f-968a-4563-a58f-8df569fdbba8

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_05SA_0020 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235539 • SRP038519 • All experiments • All runs

Sample:

SAMN02586029 • SRS559823 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_05SA_0020

Library:

Name: Pond-322764

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485268.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5WC

material_type: DNA:DNA Somatic

product_order: PDO-2815

product_part_number: P-WG-0033

project: G58245

research_project: RP-114

root_sample_id: SM-4Q74I

sample_id: SM-5G5WC

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 1.9M spots, 383.4M bases, 142.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173033	954,483	192.8M	71.8Mb	2014-02-20
SRR1173167	943,489	190.6M	71.2Mb	2014-02-20

ID:: 654018

SRA

Sequence Read Archive

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