Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473523: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322373' containing sample 'M2248'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.9M spots, 593.1M bases, 235.4Mb downloads

UUID: 133a1379-0ad9-470c-99bf-04f315d78ba5

Design: Illumina sequencing of Mycobacterium tuberculosis M2248 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235777 • SRP038514 • All experiments • All runs

Sample:

SAMN02599111 • SRS559818 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2248

Library:

Name: Pond-322373

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485179.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5JE

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57838

research_project: RP-114

root_sample_id: SM-4P8UB

sample_id: SM-5G5JE

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.9M spots, 593.1M bases, 235.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1173021	1,461,178	295.2M	117Mb	2014-02-20
SRR1173147	1,475,147	298M	118.4Mb	2014-02-20

ID:: 654013

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