Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473468: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322396' containing sample 'M2142'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 455.8M bases, 182.3Mb downloads

UUID: efdd573f-83c7-4789-8d8b-1c487523afc7

Design: Illumina sequencing of Mycobacterium tuberculosis M2142 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235800 • SRP038471 • All experiments • All runs

Sample:

SAMN02599134 • SRS559772 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2142

Library:

Name: Pond-322396

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485202.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5K2

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57856

research_project: RP-114

root_sample_id: SM-4P8UY

sample_id: SM-5G5K2

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 455.8M bases, 182.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172950	1,124,552	227.2M	90.7Mb	2014-02-20
SRR1175123	1,131,774	228.6M	91.6Mb	2014-02-24

ID:: 653958

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