Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473452: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322383' containing sample 'M1787'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.7M spots, 554.3M bases, 227.6Mb downloads

UUID: e0279de7-d909-4217-a8d4-28e80f1e6c25

Design: Illumina sequencing of Mycobacterium tuberculosis M1787 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235728 • SRP038461 • All experiments • All runs

Sample:

SAMN02599063 • SRS559761 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1787

Library:

Name: Pond-322383

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485189.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5JO

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57798

research_project: RP-114

root_sample_id: SM-4P8SX

sample_id: SM-5G5JO

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.7M spots, 554.3M bases, 227.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172931	1,369,093	276.6M	113.4Mb	2014-02-20
SRR1175032	1,374,842	277.7M	114.3Mb	2014-02-24

ID:: 653942

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