Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473445: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322387' containing sample 'M1560'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.7M spots, 542.9M bases, 219.5Mb downloads

UUID: aebd6da9-91b6-4ae5-823b-367666368d89

Design: Illumina sequencing of Mycobacterium tuberculosis M1560 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235715 • SRP038457 • All experiments • All runs

Sample:

SAMN02599050 • SRS559757 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1560

Library:

Name: Pond-322387

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485193.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5JS

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57785

research_project: RP-114

root_sample_id: SM-4P578

sample_id: SM-5G5JS

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.7M spots, 542.9M bases, 219.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172923	1,340,596	270.8M	109.2Mb	2014-02-20
SRR1175095	1,346,846	272.1M	110.2Mb	2014-02-24

ID:: 653935

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