Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473439: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322359' containing sample 'M1928'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.6M spots, 521M bases, 220.1Mb downloads

UUID: f273d2d2-066e-4e06-a10a-cd444bba3131

Design: Illumina sequencing of Mycobacterium tuberculosis M1928 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235739 • SRP038455 • All experiments • All runs

Sample:

SAMN02599074 • SRS559754 • All experiments • All runs

Organism: Mycobacterium tuberculosis M1928

Library:

Name: Pond-322359

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485165.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5IZ

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57809

research_project: RP-114

root_sample_id: SM-4P8T9

sample_id: SM-5G5IZ

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.6M spots, 521M bases, 220.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172915	1,286,828	259.9M	109.6Mb	2014-02-20
SRR1175053	1,292,590	261.1M	110.5Mb	2014-02-24

ID:: 653929

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity