Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473435: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322770' containing sample 'H1964'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 457.3M bases, 186Mb downloads

UUID: 2f464e72-e3aa-4b98-93ab-d90343e8ea82

Design: Illumina sequencing of Mycobacterium tuberculosis H1964 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235843 • SRP038453 • All experiments • All runs

Sample: Sample from Mycobacterium tuberculosis H1964

SAMN02599177 • SRS559752 • All experiments • All runs

Organism: Mycobacterium tuberculosis H1964

Library:

Name: Pond-322770

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485274.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5WI

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57932

research_project: RP-114

root_sample_id: SM-4PA4K

sample_id: SM-5G5WI

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 457.3M bases, 186Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172911	1,124,377	227.1M	92.5Mb	2014-02-20
SRR1173090	1,139,678	230.2M	93.5Mb	2014-02-20

ID:: 653925

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