Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473410: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322747' containing sample 'TKK_05SA_0012' from individual '023-06-0012'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 436Mb downloads

UUID: 41efed68-0790-4a8c-8e55-516127e6d21b

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_05SA_0012 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235533 • SRP038434 • All experiments • All runs

Sample:

SAMN02586023 • SRS559732 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_05SA_0012

Library:

Name: Pond-322747

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485251.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5VU

material_type: DNA:DNA Somatic

product_order: PDO-2815

product_part_number: P-WG-0033

project: G58243

research_project: RP-114

root_sample_id: SM-4Q74C

sample_id: SM-5G5VU

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 436Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172876	2,746,051	554.7M	218.1Mb	2014-02-20
SRR1175305	2,724,671	550.4M	217.9Mb	2014-02-24

ID:: 653900

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Sequence Read Archive

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