Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473393: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322421' containing sample 'M2343'
2 ILLUMINA (Illumina HiSeq 2000) runs: 7.5M spots, 1.5G bases, 601.4Mb downloads

UUID: 6bdb3e42-1130-4773-b944-512bdab61a6a

Design: Illumina sequencing of Mycobacterium tuberculosis M2343 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235790 • SRP038419 • All experiments • All runs

Sample:

SAMN02599124 • SRS559716 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2343

Library:

Name: Pond-322421

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485227.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5KR

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57847

research_project: RP-114

root_sample_id: SM-4P8UO

sample_id: SM-5G5KR

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 7.5M spots, 1.5G bases, 601.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172855	3,731,389	753.7M	299.2Mb	2014-02-20
SRR1175089	3,756,805	758.9M	302.2Mb	2014-02-24

ID:: 653883

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