Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473346: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322751' containing sample 'M2144'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.3M spots, 474.6M bases, 182.7Mb downloads

UUID: 534c5f08-4eb0-48a2-b675-f653f9ccfd0b

Design: Illumina sequencing of Mycobacterium tuberculosis M2144 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235812 • SRP038380 • All experiments • All runs

Sample:

SAMN02599146 • SRS559674 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2144

Library:

Name: Pond-322751

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485255.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5VY

material_type: DNA:DNA Somatic

product_order: PDO-2812

product_part_number: P-WG-0033

project: G57903

research_project: RP-114

root_sample_id: SM-4P8VB

sample_id: SM-5G5VY

work_request: 39964

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:40:42.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.3M spots, 474.6M bases, 182.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172799	1,180,897	238.5M	91.6Mb	2014-02-20
SRR1173061	1,168,772	236.1M	91.1Mb	2014-02-20

ID:: 653836

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity