Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473335: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322394' containing sample 'M2442'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.4M spots, 492.4M bases, 200.4Mb downloads

UUID: 02f930d7-6990-4ff6-8395-01ff16a0e40e

Design: Illumina sequencing of Mycobacterium tuberculosis M2442 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235802 • SRP038371 • All experiments • All runs

Sample:

SAMN02599136 • SRS559665 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2442

Library:

Name: Pond-322394

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485200.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5JZ

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57858

research_project: RP-114

root_sample_id: SM-4P8V1

sample_id: SM-5G5JZ

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.4M spots, 492.4M bases, 200.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172788	1,214,204	245.3M	99.6Mb	2014-02-20
SRR1175027	1,223,497	247.1M	100.8Mb	2014-02-24

ID:: 653825

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